Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT3P12035 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
KRT3P12035 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
KRT3P12035 ABALON-201ENST00000629058 1903 ntBASIC19.37■□□□□ 0.69
KRT3P12035 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
KRT3P12035 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
KRT3P12035 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KRT3P12035 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KRT3P12035 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 ESPNP-201ENST00000270691 2015 ntBASIC19.37■□□□□ 0.69
KRT3P12035 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KRT3P12035 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KRT3P12035 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.37■□□□□ 0.69
KRT3P12035 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
KRT3P12035 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
KRT3P12035 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
KRT3P12035 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
KRT3P12035 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT3P12035 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 AC009102.3-201ENST00000623118 1491 ntBASIC19.36■□□□□ 0.69
KRT3P12035 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
KRT3P12035 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
KRT3P12035 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 SDHAP2-201ENST00000455183 2001 ntBASIC19.36■□□□□ 0.69
KRT3P12035 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT3P12035 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
KRT3P12035 MIR149-201ENST00000384879 89 ntBASIC19.36■□□□□ 0.69
KRT3P12035 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.36■□□□□ 0.69
KRT3P12035 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
KRT3P12035 AC133561.5-201ENST00000635547 218 ntBASIC19.36■□□□□ 0.69
KRT3P12035 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KRT3P12035 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.36■□□□□ 0.69
KRT3P12035 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.36■□□□□ 0.69
KRT3P12035 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
KRT3P12035 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KRT3P12035 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.35■□□□□ 0.69
KRT3P12035 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.35■□□□□ 0.69
KRT3P12035 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.35■□□□□ 0.69
KRT3P12035 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.35■□□□□ 0.69
KRT3P12035 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
KRT3P12035 NEK4P2-201ENST00000580004 1012 ntBASIC19.35■□□□□ 0.69
KRT3P12035 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
KRT3P12035 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KRT3P12035 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms