Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
THRAP10827 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.46■□□□□ 0.55
THRAP10827 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
THRAP10827 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
THRAP10827 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.45■□□□□ 0.54
THRAP10827 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.45■□□□□ 0.54
THRAP10827 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.45■□□□□ 0.54
THRAP10827 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.45■□□□□ 0.54
THRAP10827 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
THRAP10827 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.45■□□□□ 0.54
THRAP10827 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
THRAP10827 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
THRAP10827 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.45■□□□□ 0.54
THRAP10827 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.45■□□□□ 0.54
THRAP10827 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.45■□□□□ 0.54
THRAP10827 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.45■□□□□ 0.54
THRAP10827 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.45■□□□□ 0.54
THRAP10827 AC139887.4-201ENST00000607877 719 ntBASIC18.45■□□□□ 0.54
THRAP10827 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
THRAP10827 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
THRAP10827 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
THRAP10827 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.45■□□□□ 0.54
THRAP10827 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
THRAP10827 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
THRAP10827 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.44■□□□□ 0.54
THRAP10827 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
THRAP10827 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
THRAP10827 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
THRAP10827 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
THRAP10827 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.43■□□□□ 0.54
THRAP10827 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.43■□□□□ 0.54
THRAP10827 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.43■□□□□ 0.54
THRAP10827 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.43■□□□□ 0.54
THRAP10827 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
THRAP10827 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
THRAP10827 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.43■□□□□ 0.54
THRAP10827 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.43■□□□□ 0.54
THRAP10827 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms