Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
PF4V1P10720 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.58□□□□□ -0.08
PF4V1P10720 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.58□□□□□ -0.08
PF4V1P10720 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.58□□□□□ -0.08
PF4V1P10720 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PF4V1P10720 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.58□□□□□ -0.08
PF4V1P10720 GCSHP2-201ENST00000560971 527 ntBASIC14.58□□□□□ -0.08
PF4V1P10720 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.58□□□□□ -0.08
PF4V1P10720 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PF4V1P10720 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
PF4V1P10720 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.58□□□□□ -0.08
PF4V1P10720 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
PF4V1P10720 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.58□□□□□ -0.08
PF4V1P10720 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
PF4V1P10720 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.58□□□□□ -0.08
PF4V1P10720 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.58□□□□□ -0.08
PF4V1P10720 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PF4V1P10720 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.58□□□□□ -0.08
PF4V1P10720 LINC01311-201ENST00000565162 1445 ntBASIC14.58□□□□□ -0.08
PF4V1P10720 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.58□□□□□ -0.08
PF4V1P10720 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PF4V1P10720 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PF4V1P10720 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PF4V1P10720 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PF4V1P10720 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.57□□□□□ -0.08
PF4V1P10720 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
PF4V1P10720 MIR564-202ENST00000385049 94 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.57□□□□□ -0.08
PF4V1P10720 STARP1-201ENST00000397973 869 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.57□□□□□ -0.08
PF4V1P10720 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 KRT18P23-201ENST00000435622 1283 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 HCG4P8-203ENST00000443049 980 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 KRT18P38-201ENST00000449496 1282 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.57□□□□□ -0.08
PF4V1P10720 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.57□□□□□ -0.08
PF4V1P10720 ZNF444P1-201ENST00000559497 298 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.57□□□□□ -0.08
PF4V1P10720 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 AC005332.1-201ENST00000577698 1310 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.57□□□□□ -0.08
PF4V1P10720 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 AL357033.4-201ENST00000617703 1807 ntBASIC14.57□□□□□ -0.08
PF4V1P10720 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PF4V1P10720 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.56□□□□□ -0.08
PF4V1P10720 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.56□□□□□ -0.08
PF4V1P10720 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 AC034236.2-201ENST00000606662 1610 ntBASIC14.56□□□□□ -0.08
PF4V1P10720 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PF4V1P10720 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PF4V1P10720 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PF4V1P10720 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.56□□□□□ -0.08
PF4V1P10720 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.56□□□□□ -0.08
PF4V1P10720 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.56□□□□□ -0.08
PF4V1P10720 AC024243.1-201ENST00000609234 778 ntBASIC14.56□□□□□ -0.08
PF4V1P10720 AC112497.1-201ENST00000624824 639 ntBASIC14.56□□□□□ -0.08
PF4V1P10720 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.56□□□□□ -0.08
PF4V1P10720 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.56□□□□□ -0.08
PF4V1P10720 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PF4V1P10720 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
PF4V1P10720 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms