Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 C1QL1P1-201ENST00000568105 661 ntBASIC16.55■□□□□ 0.24
HLA-DPB1P04440 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 AL499627.1-201ENST00000569373 2188 ntBASIC16.55■□□□□ 0.24
HLA-DPB1P04440 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPB1P04440 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 AC093677.2-201ENST00000600169 1863 ntBASIC16.54■□□□□ 0.24
HLA-DPB1P04440 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPB1P04440 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 HTR7P1-201ENST00000538670 1336 ntBASIC16.53■□□□□ 0.24
HLA-DPB1P04440 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.53■□□□□ 0.24
HLA-DPB1P04440 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 AC012317.2-201ENST00000623305 2251 ntBASIC16.53■□□□□ 0.24
HLA-DPB1P04440 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPB1P04440 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 AC009053.2-201ENST00000563701 2365 ntBASIC16.52■□□□□ 0.24
HLA-DPB1P04440 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DPB1P04440 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms