Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DRAP01903 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DRAP01903 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DRAP01903 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 BICD1-207ENST00000551848 1962 ntBASIC19.76■□□□□ 0.75
HLA-DRAP01903 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 AC063952.2-201ENST00000498792 1227 ntBASIC19.76■□□□□ 0.75
HLA-DRAP01903 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 AC135776.1-201ENST00000319817 2481 ntBASIC19.76■□□□□ 0.75
HLA-DRAP01903 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
HLA-DRAP01903 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HLA-DRAP01903 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 AL024508.2-201ENST00000607749 1894 ntBASIC19.75■□□□□ 0.75
HLA-DRAP01903 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 RNF165-205ENST00000588679 2904 ntBASIC19.75■□□□□ 0.75
HLA-DRAP01903 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 PVRIG2P-201ENST00000435460 978 ntBASIC19.75■□□□□ 0.75
HLA-DRAP01903 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 HOMER2P1-201ENST00000455653 964 ntBASIC19.75■□□□□ 0.75
HLA-DRAP01903 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HLA-DRAP01903 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HLA-DRAP01903 AL162741.1-201ENST00000565563 1558 ntBASIC19.74■□□□□ 0.75
HLA-DRAP01903 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DRAP01903 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HLA-DRAP01903 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DRAP01903 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DRAP01903 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DRAP01903 LINC01126-201ENST00000623515 1646 ntBASIC19.74■□□□□ 0.75
HLA-DRAP01903 AC093677.2-201ENST00000600169 1863 ntBASIC19.74■□□□□ 0.75
HLA-DRAP01903 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.74■□□□□ 0.75
HLA-DRAP01903 AC092647.4-201ENST00000457211 535 ntBASIC19.74■□□□□ 0.75
HLA-DRAP01903 AC092597.1-201ENST00000487352 616 ntBASIC19.74■□□□□ 0.75
HLA-DRAP01903 AC022616.7-201ENST00000525383 220 ntBASIC19.74■□□□□ 0.75
HLA-DRAP01903 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.74■□□□□ 0.75
HLA-DRAP01903 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HLA-DRAP01903 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DRAP01903 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.74■□□□□ 0.75
HLA-DRAP01903 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HLA-DRAP01903 AC135050.7-201ENST00000624508 2218 ntBASIC19.74■□□□□ 0.75
HLA-DRAP01903 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HLA-DRAP01903 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DRAP01903 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DRAP01903 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DRAP01903 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DRAP01903 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DRAP01903 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.73■□□□□ 0.75
HLA-DRAP01903 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DRAP01903 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HLA-DRAP01903 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HLA-DRAP01903 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms