Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC104581.1-202ENST00000635932 2618 ntBASIC19.44■□□□□ 0.7
ZBED1O96006 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ZBED1O96006 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ZBED1O96006 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ZBED1O96006 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZBED1O96006 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.43■□□□□ 0.7
ZBED1O96006 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
ZBED1O96006 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZBED1O96006 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZBED1O96006 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.43■□□□□ 0.7
ZBED1O96006 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.43■□□□□ 0.7
ZBED1O96006 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ZBED1O96006 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.43■□□□□ 0.7
ZBED1O96006 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.43■□□□□ 0.7
ZBED1O96006 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.43■□□□□ 0.7
ZBED1O96006 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.43■□□□□ 0.7
ZBED1O96006 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.43■□□□□ 0.7
ZBED1O96006 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.43■□□□□ 0.7
ZBED1O96006 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZBED1O96006 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZBED1O96006 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZBED1O96006 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZBED1O96006 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.42■□□□□ 0.7
ZBED1O96006 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
ZBED1O96006 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
ZBED1O96006 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.42■□□□□ 0.7
ZBED1O96006 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.42■□□□□ 0.7
ZBED1O96006 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ZBED1O96006 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.42■□□□□ 0.7
ZBED1O96006 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
ZBED1O96006 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.42■□□□□ 0.7
ZBED1O96006 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.42■□□□□ 0.7
ZBED1O96006 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.42■□□□□ 0.7
ZBED1O96006 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ZBED1O96006 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZBED1O96006 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZBED1O96006 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZBED1O96006 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ZBED1O96006 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZBED1O96006 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZBED1O96006 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.41■□□□□ 0.7
ZBED1O96006 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZBED1O96006 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.41■□□□□ 0.7
ZBED1O96006 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
ZBED1O96006 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.41■□□□□ 0.7
ZBED1O96006 AC009113.1-201ENST00000570267 2443 ntBASIC19.41■□□□□ 0.7
ZBED1O96006 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
ZBED1O96006 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZBED1O96006 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.41■□□□□ 0.7
ZBED1O96006 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
ZBED1O96006 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.41■□□□□ 0.7
ZBED1O96006 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.41■□□□□ 0.7
ZBED1O96006 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZBED1O96006 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZBED1O96006 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 MYLKP1-201ENST00000509077 1580 ntBASIC19.4■□□□□ 0.7
ZBED1O96006 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZBED1O96006 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms