Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE6O95741 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE6O95741 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE6O95741 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE6O95741 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE6O95741 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.04■□□□□ 0.48
CPNE6O95741 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CPNE6O95741 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE6O95741 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE6O95741 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CPNE6O95741 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CPNE6O95741 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.03■□□□□ 0.48
CPNE6O95741 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE6O95741 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE6O95741 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 AL450487.1-201ENST00000426799 995 ntBASIC18.03■□□□□ 0.48
CPNE6O95741 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE6O95741 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE6O95741 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE6O95741 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.03■□□□□ 0.48
CPNE6O95741 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE6O95741 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE6O95741 AL512353.2-201ENST00000448759 1962 ntBASIC18.02■□□□□ 0.48
CPNE6O95741 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.02■□□□□ 0.48
CPNE6O95741 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CPNE6O95741 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE6O95741 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE6O95741 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CPNE6O95741 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CPNE6O95741 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE6O95741 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CPNE6O95741 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE6O95741 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE6O95741 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE6O95741 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE6O95741 KRT8P7-201ENST00000533003 1432 ntBASIC18.02■□□□□ 0.48
CPNE6O95741 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.02■□□□□ 0.48
CPNE6O95741 MIR3917-201ENST00000580971 93 ntBASIC18.02■□□□□ 0.48
CPNE6O95741 AC011498.5-201ENST00000592027 486 ntBASIC18.02■□□□□ 0.48
CPNE6O95741 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE6O95741 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE6O95741 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CPNE6O95741 AC090164.3-201ENST00000610780 2143 ntBASIC18.02■□□□□ 0.47
CPNE6O95741 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE6O95741 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE6O95741 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE6O95741 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE6O95741 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CPNE6O95741 RCC2P3-201ENST00000418112 1537 ntBASIC18.02■□□□□ 0.47
CPNE6O95741 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.02■□□□□ 0.47
CPNE6O95741 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE6O95741 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE6O95741 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE6O95741 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.02■□□□□ 0.47
CPNE6O95741 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE6O95741 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CPNE6O95741 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE6O95741 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE6O95741 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE6O95741 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE6O95741 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
CPNE6O95741 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CPNE6O95741 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE6O95741 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CPNE6O95741 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE6O95741 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CPNE6O95741 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 AL354751.1-201ENST00000412768 1863 ntBASIC18.01■□□□□ 0.47
CPNE6O95741 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE6O95741 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms