Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.36■□□□□ 0.69
RTN3O95197 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTN3O95197 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.35■□□□□ 0.69
RTN3O95197 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN3O95197 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN3O95197 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN3O95197 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN3O95197 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RTN3O95197 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RTN3O95197 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.35■□□□□ 0.69
RTN3O95197 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.35■□□□□ 0.69
RTN3O95197 AC011498.5-201ENST00000592027 486 ntBASIC19.35■□□□□ 0.69
RTN3O95197 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RTN3O95197 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RTN3O95197 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.35■□□□□ 0.69
RTN3O95197 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 AC093525.10-201ENST00000625130 1569 ntBASIC19.35■□□□□ 0.69
RTN3O95197 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RTN3O95197 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTN3O95197 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
RTN3O95197 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN3O95197 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RTN3O95197 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTN3O95197 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN3O95197 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN3O95197 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN3O95197 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN3O95197 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.34■□□□□ 0.69
RTN3O95197 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN3O95197 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RTN3O95197 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RTN3O95197 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.34■□□□□ 0.69
RTN3O95197 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTN3O95197 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RTN3O95197 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.34■□□□□ 0.69
RTN3O95197 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.34■□□□□ 0.69
RTN3O95197 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.34■□□□□ 0.69
RTN3O95197 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RTN3O95197 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.34■□□□□ 0.69
RTN3O95197 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.33■□□□□ 0.69
RTN3O95197 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTN3O95197 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTN3O95197 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
RTN3O95197 MYLKP1-201ENST00000509077 1580 ntBASIC19.33■□□□□ 0.69
RTN3O95197 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTN3O95197 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN3O95197 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN3O95197 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTN3O95197 MIR149-201ENST00000384879 89 ntBASIC19.33■□□□□ 0.68
RTN3O95197 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.33■□□□□ 0.68
RTN3O95197 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.33■□□□□ 0.68
RTN3O95197 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.33■□□□□ 0.68
RTN3O95197 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.33■□□□□ 0.68
RTN3O95197 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RTN3O95197 AC093458.2-201ENST00000623150 629 ntBASIC19.33■□□□□ 0.68
RTN3O95197 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN3O95197 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN3O95197 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RTN3O95197 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RTN3O95197 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTN3O95197 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTN3O95197 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RTN3O95197 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.33■□□□□ 0.68
RTN3O95197 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RTN3O95197 KRT18P48-201ENST00000434763 852 ntBASIC19.32■□□□□ 0.68
RTN3O95197 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.32■□□□□ 0.68
RTN3O95197 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.32■□□□□ 0.68
RTN3O95197 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.32■□□□□ 0.68
RTN3O95197 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.32■□□□□ 0.68
RTN3O95197 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.32■□□□□ 0.68
RTN3O95197 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.32■□□□□ 0.68
RTN3O95197 AC024563.2-201ENST00000603282 481 ntBASIC19.32■□□□□ 0.68
RTN3O95197 AL121672.3-201ENST00000608644 468 ntBASIC19.32■□□□□ 0.68
RTN3O95197 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTN3O95197 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms