Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.24■□□□□ 0.51
SUPT3HO75486 ABHD17AP1-201ENST00000358206 933 ntBASIC18.24■□□□□ 0.51
SUPT3HO75486 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.24■□□□□ 0.51
SUPT3HO75486 AC012618.2-201ENST00000428058 849 ntBASIC18.24■□□□□ 0.51
SUPT3HO75486 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.24■□□□□ 0.51
SUPT3HO75486 AC116562.2-201ENST00000507042 360 ntBASIC18.24■□□□□ 0.51
SUPT3HO75486 AC097488.1-201ENST00000507834 756 ntBASIC18.24■□□□□ 0.51
SUPT3HO75486 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.24■□□□□ 0.51
SUPT3HO75486 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.24■□□□□ 0.51
SUPT3HO75486 AP001412.1-201ENST00000608405 714 ntBASIC18.24■□□□□ 0.51
SUPT3HO75486 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SUPT3HO75486 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SUPT3HO75486 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SUPT3HO75486 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SUPT3HO75486 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SUPT3HO75486 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SUPT3HO75486 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SUPT3HO75486 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.23■□□□□ 0.51
SUPT3HO75486 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SUPT3HO75486 AL023284.2-201ENST00000405850 579 ntBASIC18.23■□□□□ 0.51
SUPT3HO75486 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 MCCD1P1-208ENST00000445732 328 ntBASIC18.23■□□□□ 0.51
SUPT3HO75486 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.23■□□□□ 0.51
SUPT3HO75486 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.23■□□□□ 0.51
SUPT3HO75486 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.23■□□□□ 0.51
SUPT3HO75486 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.23■□□□□ 0.51
SUPT3HO75486 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
SUPT3HO75486 AL049637.2-201ENST00000641778 930 ntBASIC18.23■□□□□ 0.51
SUPT3HO75486 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
SUPT3HO75486 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
SUPT3HO75486 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SUPT3HO75486 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SUPT3HO75486 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SUPT3HO75486 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 GPAT2P1-201ENST00000444924 1672 ntBASIC18.22■□□□□ 0.51
SUPT3HO75486 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 MYLKP1-201ENST00000509077 1580 ntBASIC18.22■□□□□ 0.51
SUPT3HO75486 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SUPT3HO75486 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.22■□□□□ 0.51
SUPT3HO75486 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.22■□□□□ 0.51
SUPT3HO75486 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SUPT3HO75486 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.22■□□□□ 0.51
SUPT3HO75486 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.22■□□□□ 0.51
SUPT3HO75486 AC233702.5-201ENST00000584107 538 ntBASIC18.22■□□□□ 0.51
SUPT3HO75486 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.22■□□□□ 0.51
SUPT3HO75486 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
SUPT3HO75486 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SUPT3HO75486 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.22■□□□□ 0.51
SUPT3HO75486 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SUPT3HO75486 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SUPT3HO75486 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SUPT3HO75486 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SUPT3HO75486 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms