Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
ZNF254O75437 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 AP000593.1-201ENST00000393668 712 ntBASIC16.32■□□□□ 0.2
ZNF254O75437 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF254O75437 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
ZNF254O75437 B3GAT3P1-201ENST00000471720 806 ntBASIC16.32■□□□□ 0.2
ZNF254O75437 AC011506.1-201ENST00000474329 610 ntBASIC16.32■□□□□ 0.2
ZNF254O75437 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF254O75437 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF254O75437 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF254O75437 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF254O75437 AL135905.2-201ENST00000584934 1404 ntBASIC16.32■□□□□ 0.2
ZNF254O75437 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF254O75437 AP000692.2-201ENST00000608391 879 ntBASIC16.32■□□□□ 0.2
ZNF254O75437 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF254O75437 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF254O75437 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF254O75437 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF254O75437 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 HTR7P1-202ENST00000624664 4411 ntBASIC16.31■□□□□ 0.2
ZNF254O75437 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 ESPNP-201ENST00000270691 2015 ntBASIC16.31■□□□□ 0.2
ZNF254O75437 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF254O75437 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF254O75437 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF254O75437 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF254O75437 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF254O75437 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF254O75437 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF254O75437 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
ZNF254O75437 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ZNF254O75437 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.31■□□□□ 0.2
ZNF254O75437 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF254O75437 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF254O75437 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
ZNF254O75437 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 AC008556.1-201ENST00000610908 2040 ntBASIC16.31■□□□□ 0.2
ZNF254O75437 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF254O75437 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF254O75437 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF254O75437 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ZNF254O75437 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF254O75437 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF254O75437 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.3■□□□□ 0.2
ZNF254O75437 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF254O75437 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
ZNF254O75437 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
ZNF254O75437 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF254O75437 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF254O75437 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF254O75437 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms