Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.19■□□□□ 0.66
OPHN1O60890 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.19■□□□□ 0.66
OPHN1O60890 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.19■□□□□ 0.66
OPHN1O60890 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
OPHN1O60890 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.19■□□□□ 0.66
OPHN1O60890 PCED1CP-201ENST00000419887 785 ntBASIC19.19■□□□□ 0.66
OPHN1O60890 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.19■□□□□ 0.66
OPHN1O60890 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.19■□□□□ 0.66
OPHN1O60890 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.19■□□□□ 0.66
OPHN1O60890 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.19■□□□□ 0.66
OPHN1O60890 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.19■□□□□ 0.66
OPHN1O60890 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.19■□□□□ 0.66
OPHN1O60890 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.19■□□□□ 0.66
OPHN1O60890 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
OPHN1O60890 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.19■□□□□ 0.66
OPHN1O60890 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
OPHN1O60890 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OPHN1O60890 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.18■□□□□ 0.66
OPHN1O60890 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
OPHN1O60890 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
OPHN1O60890 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.18■□□□□ 0.66
OPHN1O60890 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
OPHN1O60890 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.18■□□□□ 0.66
OPHN1O60890 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.18■□□□□ 0.66
OPHN1O60890 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.18■□□□□ 0.66
OPHN1O60890 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.18■□□□□ 0.66
OPHN1O60890 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.18■□□□□ 0.66
OPHN1O60890 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
OPHN1O60890 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
OPHN1O60890 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.18■□□□□ 0.66
OPHN1O60890 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.18■□□□□ 0.66
OPHN1O60890 AL121956.5-201ENST00000625261 221 ntBASIC19.18■□□□□ 0.66
OPHN1O60890 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPHN1O60890 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPHN1O60890 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.18■□□□□ 0.66
OPHN1O60890 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
OPHN1O60890 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPHN1O60890 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
OPHN1O60890 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPHN1O60890 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
OPHN1O60890 AC096733.2-201ENST00000609937 1394 ntBASIC19.18■□□□□ 0.66
OPHN1O60890 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
OPHN1O60890 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.17■□□□□ 0.66
OPHN1O60890 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
OPHN1O60890 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.17■□□□□ 0.66
OPHN1O60890 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.17■□□□□ 0.66
OPHN1O60890 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.17■□□□□ 0.66
OPHN1O60890 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.17■□□□□ 0.66
OPHN1O60890 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.17■□□□□ 0.66
OPHN1O60890 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.17■□□□□ 0.66
OPHN1O60890 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
OPHN1O60890 AL031432.5-201ENST00000641059 760 ntBASIC19.17■□□□□ 0.66
OPHN1O60890 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
OPHN1O60890 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
OPHN1O60890 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
OPHN1O60890 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.17■□□□□ 0.66
OPHN1O60890 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
OPHN1O60890 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPHN1O60890 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.16■□□□□ 0.66
OPHN1O60890 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPHN1O60890 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPHN1O60890 AC073592.3-201ENST00000625118 1834 ntBASIC19.16■□□□□ 0.66
OPHN1O60890 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.16■□□□□ 0.66
OPHN1O60890 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
OPHN1O60890 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPHN1O60890 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OPHN1O60890 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.16■□□□□ 0.66
OPHN1O60890 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.16■□□□□ 0.66
OPHN1O60890 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.16■□□□□ 0.66
OPHN1O60890 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.16■□□□□ 0.66
OPHN1O60890 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms