Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TSPAN3O60637 MIR149-201ENST00000384879 89 ntBASIC18.92■□□□□ 0.62
TSPAN3O60637 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.92■□□□□ 0.62
TSPAN3O60637 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.92■□□□□ 0.62
TSPAN3O60637 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.92■□□□□ 0.62
TSPAN3O60637 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.92■□□□□ 0.62
TSPAN3O60637 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.92■□□□□ 0.62
TSPAN3O60637 AC005332.3-201ENST00000589904 676 ntBASIC18.92■□□□□ 0.62
TSPAN3O60637 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 AL121672.3-201ENST00000608644 468 ntBASIC18.92■□□□□ 0.62
TSPAN3O60637 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TSPAN3O60637 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.92■□□□□ 0.62
TSPAN3O60637 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TSPAN3O60637 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.92■□□□□ 0.62
TSPAN3O60637 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TSPAN3O60637 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TSPAN3O60637 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN3O60637 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN3O60637 AC009102.3-201ENST00000623118 1491 ntBASIC18.91■□□□□ 0.62
TSPAN3O60637 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.91■□□□□ 0.62
TSPAN3O60637 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TSPAN3O60637 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TSPAN3O60637 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN3O60637 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
TSPAN3O60637 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN3O60637 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN3O60637 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN3O60637 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.91■□□□□ 0.62
TSPAN3O60637 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN3O60637 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TSPAN3O60637 TSSC2-201ENST00000450217 709 ntBASIC18.91■□□□□ 0.62
TSPAN3O60637 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.91■□□□□ 0.62
TSPAN3O60637 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.91■□□□□ 0.62
TSPAN3O60637 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.91■□□□□ 0.62
TSPAN3O60637 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.91■□□□□ 0.62
TSPAN3O60637 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TSPAN3O60637 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.91■□□□□ 0.62
TSPAN3O60637 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TSPAN3O60637 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.91■□□□□ 0.62
TSPAN3O60637 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TSPAN3O60637 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.91■□□□□ 0.62
TSPAN3O60637 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TSPAN3O60637 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.9■□□□□ 0.62
TSPAN3O60637 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.9■□□□□ 0.62
TSPAN3O60637 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TSPAN3O60637 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.9■□□□□ 0.62
TSPAN3O60637 KRT8P26-201ENST00000534154 1276 ntBASIC18.9■□□□□ 0.62
TSPAN3O60637 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.9■□□□□ 0.62
TSPAN3O60637 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.9■□□□□ 0.62
TSPAN3O60637 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TSPAN3O60637 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.9■□□□□ 0.62
TSPAN3O60637 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.9■□□□□ 0.62
TSPAN3O60637 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TSPAN3O60637 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TSPAN3O60637 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TSPAN3O60637 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.9■□□□□ 0.62
TSPAN3O60637 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TSPAN3O60637 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
TSPAN3O60637 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TSPAN3O60637 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
TSPAN3O60637 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
TSPAN3O60637 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.89■□□□□ 0.61
TSPAN3O60637 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.89■□□□□ 0.61
TSPAN3O60637 NPAP1P7-201ENST00000613027 823 ntBASIC18.89■□□□□ 0.61
TSPAN3O60637 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 CROCCP3-202ENST00000420820 1947 ntBASIC18.89■□□□□ 0.61
TSPAN3O60637 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 SDHAP2-201ENST00000455183 2001 ntBASIC18.89■□□□□ 0.61
TSPAN3O60637 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.89■□□□□ 0.61
TSPAN3O60637 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TSPAN3O60637 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.89■□□□□ 0.61
TSPAN3O60637 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TSPAN3O60637 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.89■□□□□ 0.61
TSPAN3O60637 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.89■□□□□ 0.61
TSPAN3O60637 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TSPAN3O60637 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms