Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.63■□□□□ 0.89
ACTN4O43707 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ACTN4O43707 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.63■□□□□ 0.89
ACTN4O43707 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ACTN4O43707 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ACTN4O43707 KRT8P7-201ENST00000533003 1432 ntBASIC20.62■□□□□ 0.89
ACTN4O43707 KRT8P9-201ENST00000558927 1449 ntBASIC20.62■□□□□ 0.89
ACTN4O43707 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ACTN4O43707 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 TSPY14P-201ENST00000303979 915 ntBASIC20.62■□□□□ 0.89
ACTN4O43707 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ACTN4O43707 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.62■□□□□ 0.89
ACTN4O43707 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 AC116562.4-202ENST00000641738 218 ntBASIC20.62■□□□□ 0.89
ACTN4O43707 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ACTN4O43707 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.62■□□□□ 0.89
ACTN4O43707 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.61■□□□□ 0.89
ACTN4O43707 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.61■□□□□ 0.89
ACTN4O43707 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ACTN4O43707 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
ACTN4O43707 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.61■□□□□ 0.89
ACTN4O43707 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.61■□□□□ 0.89
ACTN4O43707 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.61■□□□□ 0.89
ACTN4O43707 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.61■□□□□ 0.89
ACTN4O43707 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ACTN4O43707 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 CYP2D8P-201ENST00000433633 1490 ntBASIC20.61■□□□□ 0.89
ACTN4O43707 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ACTN4O43707 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACTN4O43707 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ACTN4O43707 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ACTN4O43707 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ACTN4O43707 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 FLJ13224-201ENST00000313737 1514 ntBASIC20.6■□□□□ 0.89
ACTN4O43707 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.6■□□□□ 0.89
ACTN4O43707 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.6■□□□□ 0.89
ACTN4O43707 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.6■□□□□ 0.89
ACTN4O43707 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
ACTN4O43707 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.6■□□□□ 0.89
ACTN4O43707 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.6■□□□□ 0.89
ACTN4O43707 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ACTN4O43707 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.6■□□□□ 0.89
ACTN4O43707 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.6■□□□□ 0.89
ACTN4O43707 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.6■□□□□ 0.89
ACTN4O43707 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACTN4O43707 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms