Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF13O43567 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RNF13O43567 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF13O43567 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RNF13O43567 TSPY7P-201ENST00000431358 1114 ntBASIC16.77■□□□□ 0.28
RNF13O43567 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF13O43567 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF13O43567 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.77■□□□□ 0.28
RNF13O43567 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.77■□□□□ 0.28
RNF13O43567 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF13O43567 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF13O43567 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF13O43567 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF13O43567 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF13O43567 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF13O43567 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF13O43567 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF13O43567 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RNF13O43567 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RNF13O43567 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF13O43567 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF13O43567 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF13O43567 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF13O43567 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF13O43567 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RNF13O43567 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 AC008764.6-201ENST00000595909 2069 ntBASIC16.76■□□□□ 0.27
RNF13O43567 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF13O43567 AC008556.1-201ENST00000610908 2040 ntBASIC16.76■□□□□ 0.27
RNF13O43567 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF13O43567 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF13O43567 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.76■□□□□ 0.27
RNF13O43567 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF13O43567 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF13O43567 AC008622.2-201ENST00000617006 1229 ntBASIC16.76■□□□□ 0.27
RNF13O43567 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF13O43567 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF13O43567 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF13O43567 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF13O43567 AL109659.2-201ENST00000606809 1674 ntBASIC16.75■□□□□ 0.27
RNF13O43567 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RNF13O43567 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 MCCD1P1-208ENST00000445732 328 ntBASIC16.75■□□□□ 0.27
RNF13O43567 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF13O43567 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF13O43567 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 AC112777.1-201ENST00000540175 1423 ntBASIC16.75■□□□□ 0.27
RNF13O43567 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF13O43567 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF13O43567 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF13O43567 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
RNF13O43567 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RNF13O43567 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF13O43567 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF13O43567 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
RNF13O43567 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF13O43567 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF13O43567 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF13O43567 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF13O43567 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF13O43567 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RNF13O43567 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF13O43567 CA15P1-201ENST00000481698 905 ntBASIC16.74■□□□□ 0.27
RNF13O43567 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF13O43567 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF13O43567 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF13O43567 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF13O43567 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms