Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 BX276092.5-203ENST00000456199 560 ntBASIC19.64■□□□□ 0.73
SPTLC1O15269 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.64■□□□□ 0.73
SPTLC1O15269 KRT8P26-201ENST00000534154 1276 ntBASIC19.64■□□□□ 0.73
SPTLC1O15269 AL121672.3-201ENST00000608644 468 ntBASIC19.64■□□□□ 0.73
SPTLC1O15269 AC092119.3-201ENST00000612618 583 ntBASIC19.64■□□□□ 0.73
SPTLC1O15269 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC1O15269 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.64■□□□□ 0.73
SPTLC1O15269 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC1O15269 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC1O15269 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC1O15269 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC1O15269 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTLC1O15269 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SPTLC1O15269 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SPTLC1O15269 AC087289.5-201ENST00000586076 3175 ntBASIC19.63■□□□□ 0.73
SPTLC1O15269 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.63■□□□□ 0.73
SPTLC1O15269 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SPTLC1O15269 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SPTLC1O15269 IGHGP-201ENST00000390555 1178 ntBASIC19.63■□□□□ 0.73
SPTLC1O15269 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.63■□□□□ 0.73
SPTLC1O15269 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.63■□□□□ 0.73
SPTLC1O15269 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.63■□□□□ 0.73
SPTLC1O15269 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
SPTLC1O15269 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.63■□□□□ 0.73
SPTLC1O15269 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.63■□□□□ 0.73
SPTLC1O15269 MIR3180-1-201ENST00000580374 94 ntBASIC19.63■□□□□ 0.73
SPTLC1O15269 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.63■□□□□ 0.73
SPTLC1O15269 MIR3180-3-201ENST00000584616 94 ntBASIC19.63■□□□□ 0.73
SPTLC1O15269 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.63■□□□□ 0.73
SPTLC1O15269 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTLC1O15269 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.62■□□□□ 0.73
SPTLC1O15269 AL024508.2-201ENST00000607749 1894 ntBASIC19.62■□□□□ 0.73
SPTLC1O15269 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SPTLC1O15269 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.62■□□□□ 0.73
SPTLC1O15269 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SPTLC1O15269 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.62■□□□□ 0.73
SPTLC1O15269 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.62■□□□□ 0.73
SPTLC1O15269 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SPTLC1O15269 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.62■□□□□ 0.73
SPTLC1O15269 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.62■□□□□ 0.73
SPTLC1O15269 BX323043.1-201ENST00000641006 1765 ntBASIC19.62■□□□□ 0.73
SPTLC1O15269 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.62■□□□□ 0.73
SPTLC1O15269 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTLC1O15269 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SPTLC1O15269 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.61■□□□□ 0.73
SPTLC1O15269 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.61■□□□□ 0.73
SPTLC1O15269 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SPTLC1O15269 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 AC093503.3-201ENST00000624917 2352 ntBASIC19.61■□□□□ 0.73
SPTLC1O15269 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.61■□□□□ 0.73
SPTLC1O15269 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.61■□□□□ 0.73
SPTLC1O15269 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.61■□□□□ 0.73
SPTLC1O15269 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.61■□□□□ 0.73
SPTLC1O15269 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.61■□□□□ 0.73
SPTLC1O15269 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.61■□□□□ 0.73
SPTLC1O15269 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.61■□□□□ 0.73
SPTLC1O15269 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.61■□□□□ 0.73
SPTLC1O15269 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTLC1O15269 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPTLC1O15269 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms