Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.94■□□□□ 0.46
E2F3O00716 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.94■□□□□ 0.46
E2F3O00716 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
E2F3O00716 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.94■□□□□ 0.46
E2F3O00716 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
E2F3O00716 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
E2F3O00716 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
E2F3O00716 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
E2F3O00716 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
E2F3O00716 AC099343.3-201ENST00000605834 2503 ntBASIC17.94■□□□□ 0.46
E2F3O00716 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.94■□□□□ 0.46
E2F3O00716 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.93■□□□□ 0.46
E2F3O00716 REXO1L9P-201ENST00000604264 2108 ntBASIC17.93■□□□□ 0.46
E2F3O00716 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
E2F3O00716 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
E2F3O00716 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.93■□□□□ 0.46
E2F3O00716 AC073508.3-201ENST00000619697 1419 ntBASIC17.93■□□□□ 0.46
E2F3O00716 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
E2F3O00716 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
E2F3O00716 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.93■□□□□ 0.46
E2F3O00716 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.93■□□□□ 0.46
E2F3O00716 TSPY17P-201ENST00000450329 467 ntBASIC17.93■□□□□ 0.46
E2F3O00716 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
E2F3O00716 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
E2F3O00716 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.93■□□□□ 0.46
E2F3O00716 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
E2F3O00716 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
E2F3O00716 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.93■□□□□ 0.46
E2F3O00716 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.93■□□□□ 0.46
E2F3O00716 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.93■□□□□ 0.46
E2F3O00716 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
E2F3O00716 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
E2F3O00716 AC067852.2-201ENST00000590513 2313 ntBASIC17.93■□□□□ 0.46
E2F3O00716 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
E2F3O00716 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.93■□□□□ 0.46
E2F3O00716 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.93■□□□□ 0.46
E2F3O00716 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
E2F3O00716 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.92■□□□□ 0.46
E2F3O00716 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.92■□□□□ 0.46
E2F3O00716 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
E2F3O00716 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 AC092338.2-201ENST00000568827 1415 ntBASIC17.92■□□□□ 0.46
E2F3O00716 HOXB1-202ENST00000577092 1414 ntBASIC17.92■□□□□ 0.46
E2F3O00716 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.92■□□□□ 0.46
E2F3O00716 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
E2F3O00716 SLC25A3P1-201ENST00000443844 931 ntBASIC17.92■□□□□ 0.46
E2F3O00716 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.92■□□□□ 0.46
E2F3O00716 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.92■□□□□ 0.46
E2F3O00716 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 AC138028.4-201ENST00000564984 1845 ntBASIC17.92■□□□□ 0.46
E2F3O00716 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
E2F3O00716 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.92■□□□□ 0.46
E2F3O00716 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 KRT18P22-201ENST00000402024 1347 ntBASIC17.92■□□□□ 0.46
E2F3O00716 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
E2F3O00716 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 PCDHB18P-201ENST00000524813 2368 ntBASIC17.91■□□□□ 0.46
E2F3O00716 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.91■□□□□ 0.46
E2F3O00716 SDHAP2-201ENST00000455183 2001 ntBASIC17.91■□□□□ 0.46
E2F3O00716 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.91■□□□□ 0.46
E2F3O00716 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.91■□□□□ 0.46
E2F3O00716 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.91■□□□□ 0.46
E2F3O00716 AL137013.1-201ENST00000432946 1228 ntBASIC17.91■□□□□ 0.46
E2F3O00716 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.91■□□□□ 0.46
E2F3O00716 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 WWOX-216ENST00000569818 525 ntBASIC17.91■□□□□ 0.46
E2F3O00716 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 CR769767.2-201ENST00000622735 460 ntBASIC17.91■□□□□ 0.46
E2F3O00716 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.91■□□□□ 0.46
E2F3O00716 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
E2F3O00716 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.91■□□□□ 0.46
E2F3O00716 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.91■□□□□ 0.46
E2F3O00716 AL163051.1-201ENST00000569214 1512 ntBASIC17.91■□□□□ 0.46
E2F3O00716 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
E2F3O00716 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
E2F3O00716 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms