Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC28A1O00337 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC28A1O00337 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC28A1O00337 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC28A1O00337 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A1O00337 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 GCSHP5-201ENST00000443090 522 ntBASIC17.72■□□□□ 0.43
SLC28A1O00337 AC098590.1-201ENST00000468126 897 ntBASIC17.72■□□□□ 0.43
SLC28A1O00337 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC28A1O00337 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SLC28A1O00337 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC28A1O00337 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A1O00337 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC28A1O00337 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC28A1O00337 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC28A1O00337 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC28A1O00337 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC28A1O00337 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC28A1O00337 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC28A1O00337 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC28A1O00337 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC28A1O00337 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC28A1O00337 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC28A1O00337 AP005242.2-201ENST00000580065 1175 ntBASIC17.71■□□□□ 0.43
SLC28A1O00337 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SLC28A1O00337 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC28A1O00337 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.71■□□□□ 0.43
SLC28A1O00337 AL163051.1-201ENST00000569214 1512 ntBASIC17.71■□□□□ 0.43
SLC28A1O00337 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC28A1O00337 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC28A1O00337 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC28A1O00337 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC28A1O00337 AC036111.1-201ENST00000533973 1582 ntBASIC17.7■□□□□ 0.42
SLC28A1O00337 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A1O00337 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SLC28A1O00337 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC28A1O00337 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC28A1O00337 GNAS-203ENST00000306120 1878 ntBASIC17.7■□□□□ 0.42
SLC28A1O00337 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC28A1O00337 MIR149-201ENST00000384879 89 ntBASIC17.7■□□□□ 0.42
SLC28A1O00337 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A1O00337 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC28A1O00337 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC28A1O00337 AC026471.5-201ENST00000615068 467 ntBASIC17.7■□□□□ 0.42
SLC28A1O00337 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC28A1O00337 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A1O00337 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC28A1O00337 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SLC28A1O00337 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A1O00337 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A1O00337 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLC28A1O00337 AC067852.2-201ENST00000590513 2313 ntBASIC17.7■□□□□ 0.42
SLC28A1O00337 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A1O00337 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SLC28A1O00337 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC28A1O00337 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A1O00337 AC009102.3-201ENST00000623118 1491 ntBASIC17.69■□□□□ 0.42
SLC28A1O00337 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC28A1O00337 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A1O00337 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A1O00337 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A1O00337 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms