Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NPIPA2E9PIF3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 HEIH-201ENST00000623091 1652 ntBASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 AC011498.5-201ENST00000592027 486 ntBASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 AL136038.4-201ENST00000603606 1261 ntBASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA2E9PIF3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 CLEC4GP1-201ENST00000596555 870 ntBASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA2E9PIF3 PKD1P1-201ENST00000458669 6805 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 OR6D1P-202ENST00000641007 5290 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 KRT8P7-201ENST00000533003 1432 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 MIR564-202ENST00000385049 94 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 ATP5G2P1-201ENST00000433580 426 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 DUSP5P1-201ENST00000441325 1139 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 BX276092.5-203ENST00000456199 560 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 AC092119.3-201ENST00000612618 583 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 AC068587.9-201ENST00000641814 219 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 AL391807.1-203ENST00000604392 2365 ntBASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPA2E9PIF3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NPIPA2E9PIF3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms