Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 PVRIG2P-201ENST00000435460 978 ntBASIC14.5□□□□□ -0.09
LINC01548A6NM66 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.5□□□□□ -0.09
LINC01548A6NM66 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 AL358472.4-201ENST00000633140 710 ntBASIC14.5□□□□□ -0.09
LINC01548A6NM66 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 AC009102.3-201ENST00000623118 1491 ntBASIC14.5□□□□□ -0.09
LINC01548A6NM66 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 AC005332.1-201ENST00000577698 1310 ntBASIC14.49□□□□□ -0.09
LINC01548A6NM66 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 MIR149-201ENST00000384879 89 ntBASIC14.49□□□□□ -0.09
LINC01548A6NM66 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 AL121956.5-201ENST00000625261 221 ntBASIC14.49□□□□□ -0.09
LINC01548A6NM66 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01548A6NM66 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01548A6NM66 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 PCED1CP-201ENST00000419887 785 ntBASIC14.48□□□□□ -0.09
LINC01548A6NM66 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 AC009113.1-201ENST00000570267 2443 ntBASIC14.48□□□□□ -0.09
LINC01548A6NM66 LETM1P2-201ENST00000597330 2178 ntBASIC14.48□□□□□ -0.09
LINC01548A6NM66 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms