Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 HEIH-201ENST00000623091 1652 ntBASIC21.3■■□□□ 1
TMEM88BA6NKF7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM88BA6NKF7 Z82202.1-201ENST00000623446 1880 ntBASIC21.3■■□□□ 1
TMEM88BA6NKF7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TMEM88BA6NKF7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM88BA6NKF7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 AL512408.1-201ENST00000569378 2000 ntBASIC21.29■■□□□ 1
TMEM88BA6NKF7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM88BA6NKF7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM88BA6NKF7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM88BA6NKF7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM88BA6NKF7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM88BA6NKF7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM88BA6NKF7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 AC069262.1-201ENST00000539058 672 ntBASIC21.29■■□□□ 1
TMEM88BA6NKF7 AC005498.2-205ENST00000593218 784 ntBASIC21.29■■□□□ 1
TMEM88BA6NKF7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM88BA6NKF7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.29■■□□□ 1
TMEM88BA6NKF7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM88BA6NKF7 Z98044.1-201ENST00000632503 1764 ntBASIC21.28■■□□□ 1
TMEM88BA6NKF7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM88BA6NKF7 TEX21P-204ENST00000641479 1693 ntBASIC21.28■■□□□ 1
TMEM88BA6NKF7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TMEM88BA6NKF7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.28■■□□□ 1
TMEM88BA6NKF7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TMEM88BA6NKF7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM88BA6NKF7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.28■■□□□ 1
TMEM88BA6NKF7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM88BA6NKF7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM88BA6NKF7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.28■■□□□ 1
TMEM88BA6NKF7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.28■■□□□ 1
TMEM88BA6NKF7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM88BA6NKF7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM88BA6NKF7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM88BA6NKF7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM88BA6NKF7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM88BA6NKF7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 Z92544.3-201ENST00000624747 417 ntBASIC21.27■■□□□ 1
TMEM88BA6NKF7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEM88BA6NKF7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEM88BA6NKF7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.27■■□□□ 1
TMEM88BA6NKF7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TMEM88BA6NKF7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
TMEM88BA6NKF7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TMEM88BA6NKF7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 AL391422.3-201ENST00000603791 2761 ntBASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 AC079776.2-201ENST00000641154 1609 ntBASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 AC012645.4-201ENST00000610691 1061 ntBASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM88BA6NKF7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms