Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 KRT8P7-201ENST00000533003 1432 ntBASIC18.66■□□□□ 0.58
CAPN8A6NHC0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 AP000997.3-201ENST00000623333 2250 ntBASIC18.66■□□□□ 0.58
CAPN8A6NHC0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 AC117947.1-201ENST00000427448 529 ntBASIC18.66■□□□□ 0.58
CAPN8A6NHC0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 KRT18P23-201ENST00000435622 1283 ntBASIC18.66■□□□□ 0.58
CAPN8A6NHC0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 KRT18P41-201ENST00000518924 1277 ntBASIC18.66■□□□□ 0.58
CAPN8A6NHC0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 AC139887.4-201ENST00000607877 719 ntBASIC18.66■□□□□ 0.58
CAPN8A6NHC0 AL023973.1-201ENST00000624619 620 ntBASIC18.66■□□□□ 0.58
CAPN8A6NHC0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CAPN8A6NHC0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 YBX1P2-201ENST00000489612 999 ntBASIC18.65■□□□□ 0.58
CAPN8A6NHC0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 AL121894.2-201ENST00000602977 491 ntBASIC18.65■□□□□ 0.58
CAPN8A6NHC0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN8A6NHC0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CAPN8A6NHC0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CAPN8A6NHC0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.64■□□□□ 0.58
CAPN8A6NHC0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.64■□□□□ 0.58
CAPN8A6NHC0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.64■□□□□ 0.57
CAPN8A6NHC0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 AL031432.5-201ENST00000641059 760 ntBASIC18.64■□□□□ 0.57
CAPN8A6NHC0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CAPN8A6NHC0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms