Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AL356309.3-201ENST00000624132 1934 ntBASIC12.98□□□□□ -0.33
LINC01546A6NGU7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC01546A6NGU7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 PRSS44-201ENST00000515154 1146 ntBASIC12.97□□□□□ -0.33
LINC01546A6NGU7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 AC231657.2-201ENST00000624556 255 ntBASIC12.97□□□□□ -0.33
LINC01546A6NGU7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
LINC01546A6NGU7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 KRT8P11-201ENST00000409686 1436 ntBASIC12.96□□□□□ -0.33
LINC01546A6NGU7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC01546A6NGU7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.96□□□□□ -0.34
LINC01546A6NGU7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01546A6NGU7 AC090340.1-201ENST00000620778 4980 ntBASIC12.96□□□□□ -0.34
LINC01546A6NGU7 PCDHA14-201ENST00000506751 2298 ntBASIC12.96□□□□□ -0.34
LINC01546A6NGU7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
LINC01546A6NGU7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.96□□□□□ -0.34
LINC01546A6NGU7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01546A6NGU7 AL109659.2-201ENST00000606809 1674 ntBASIC12.96□□□□□ -0.34
LINC01546A6NGU7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC01546A6NGU7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms