Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 AC099343.3-201ENST00000605834 2503 ntBASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 AL032819.2-201ENST00000624543 2162 ntBASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PLEKHD1A6NEE1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
PLEKHD1A6NEE1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC28.2■■■□□ 2.11
PLEKHD1A6NEE1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
PLEKHD1A6NEE1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PLEKHD1A6NEE1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 KRT18P3-201ENST00000451602 1288 ntBASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 AC008735.5-201ENST00000623544 497 ntBASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PLEKHD1A6NEE1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 GPX1P2-201ENST00000429271 606 ntBASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 AC010327.4-202ENST00000591484 748 ntBASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 AC083906.6-201ENST00000641366 219 ntBASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC28.19■■■□□ 2.1
PLEKHD1A6NEE1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 AL139288.1-201ENST00000623748 933 ntBASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PLEKHD1A6NEE1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 PCDHAC2-203ENST00000615316 3011 ntBASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 MYLKP1-201ENST00000509077 1580 ntBASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 YBX2P1-201ENST00000394192 760 ntBASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 LINC00602-201ENST00000629776 2065 ntBASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PLEKHD1A6NEE1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 AP001160.2-201ENST00000596071 487 ntBASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PLEKHD1A6NEE1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PLEKHD1A6NEE1 HMGN1P19-201ENST00000436976 333 ntBASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms