Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.42■□□□□ 0.38
CLCA3PQ9Y6N3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 KRT8P7-201ENST00000533003 1432 ntBASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 AC117947.1-201ENST00000427448 529 ntBASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 AC104076.2-201ENST00000448912 469 ntBASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 AL049597.2-201ENST00000565575 961 ntBASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 AL023973.1-201ENST00000624619 620 ntBASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 AC112497.1-201ENST00000624824 639 ntBASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLCA3PQ9Y6N3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 RNF152P1-201ENST00000397754 604 ntBASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 KRT18P23-201ENST00000435622 1283 ntBASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 AC006011.2-201ENST00000621313 1158 ntBASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 MTMR9LP-203ENST00000426597 1545 ntBASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 Z98044.1-201ENST00000632503 1764 ntBASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLCA3PQ9Y6N3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLCA3PQ9Y6N3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLCA3PQ9Y6N3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.39■□□□□ 0.38
CLCA3PQ9Y6N3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLCA3PQ9Y6N3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms