Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
GPC6Q9Y625 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC6Q9Y625 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 AC091390.4-202ENST00000476426 537 ntBASIC17.43■□□□□ 0.38
GPC6Q9Y625 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.43■□□□□ 0.38
GPC6Q9Y625 AL391005.1-201ENST00000623953 2435 ntBASIC17.43■□□□□ 0.38
GPC6Q9Y625 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GPC6Q9Y625 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC6Q9Y625 AC046158.3-201ENST00000624947 2558 ntBASIC17.42■□□□□ 0.38
GPC6Q9Y625 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 FSCN1P1-201ENST00000568912 1481 ntBASIC17.42■□□□□ 0.38
GPC6Q9Y625 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
GPC6Q9Y625 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC6Q9Y625 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms