Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 DUSP5P1-201ENST00000441325 1139 ntBASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 HOMER2P1-201ENST00000455653 964 ntBASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 TSPY17P-201ENST00000450329 467 ntBASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 AL512604.3-201ENST00000569583 964 ntBASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 AL023803.3-201ENST00000615559 522 ntBASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 AL031432.5-201ENST00000641059 760 ntBASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA4Q9Y5G9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 AL671277.2-201ENST00000458060 996 ntBASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 AL359075.1-203ENST00000462729 1002 ntBASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 AC141586.5-201ENST00000624546 2050 ntBASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA4Q9Y5G9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA4Q9Y5G9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms