Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGB6Q9Y5F9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGB6Q9Y5F9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 FP475955.4-201ENST00000623131 1990 ntBASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 AL121956.5-201ENST00000625261 221 ntBASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB6Q9Y5F9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 FEM1AP3-201ENST00000403722 1741 ntBASIC17.38■□□□□ 0.37
PCDHGB6Q9Y5F9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms