Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.16■□□□□ 0.18
RHBDD3Q9Y3P4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 AL355355.2-201ENST00000442321 338 ntBASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 AC008550.1-201ENST00000511500 884 ntBASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 REXO1L10P-201ENST00000615707 1290 ntBASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 REXO1L12P-201ENST00000622156 912 ntBASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RHBDD3Q9Y3P4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.18
RHBDD3Q9Y3P4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
RHBDD3Q9Y3P4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 DGCR10-201ENST00000609839 495 ntBASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 AC026471.5-201ENST00000615068 467 ntBASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.14■□□□□ 0.17
RHBDD3Q9Y3P4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 MFAP1P1-201ENST00000442257 1255 ntBASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.13■□□□□ 0.17
RHBDD3Q9Y3P4 AC097488.1-201ENST00000507834 756 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms