Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HHLA3Q9XRX5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 AC004980.1-204ENST00000429707 299 ntBASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 AP006294.2-201ENST00000641667 209 ntBASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
HHLA3Q9XRX5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 GNAS-203ENST00000306120 1878 ntBASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 FEM1AP3-201ENST00000403722 1741 ntBASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 RPS2P55-201ENST00000397318 883 ntBASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.48□□□□□ -0.25
HHLA3Q9XRX5 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms