Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
RNF216Q9NWF9 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF216Q9NWF9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF216Q9NWF9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF216Q9NWF9 NEFHP1-201ENST00000412845 2629 ntBASIC21.25■□□□□ 0.99
RNF216Q9NWF9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 KRT18P57-201ENST00000443599 1254 ntBASIC21.24■□□□□ 0.99
RNF216Q9NWF9 CCR12P-201ENST00000446203 998 ntBASIC21.24■□□□□ 0.99
RNF216Q9NWF9 AC011506.1-201ENST00000474329 610 ntBASIC21.24■□□□□ 0.99
RNF216Q9NWF9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 AL691403.2-201ENST00000618460 490 ntBASIC21.24■□□□□ 0.99
RNF216Q9NWF9 AC009269.6-201ENST00000621778 588 ntBASIC21.24■□□□□ 0.99
RNF216Q9NWF9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.24■□□□□ 0.99
RNF216Q9NWF9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 AC093484.2-201ENST00000580996 2166 ntBASIC21.24■□□□□ 0.99
RNF216Q9NWF9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RNF216Q9NWF9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 SYT14P1-202ENST00000600441 1448 ntBASIC21.23■□□□□ 0.99
RNF216Q9NWF9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 AL691432.2-201ENST00000607222 2038 ntBASIC21.23■□□□□ 0.99
RNF216Q9NWF9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 AL359918.2-201ENST00000412311 497 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 AC131097.1-201ENST00000437438 739 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 MTND4P6-201ENST00000438297 472 ntBASIC21.23■□□□□ 0.99
RNF216Q9NWF9 BTBD7P2-201ENST00000441962 620 ntBASIC21.23■□□□□ 0.99
RNF216Q9NWF9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 SLC25A1P4-201ENST00000567977 778 ntBASIC21.23■□□□□ 0.99
RNF216Q9NWF9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF216Q9NWF9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 AC087888.1-201ENST00000550884 1254 ntBASIC21.22■□□□□ 0.99
RNF216Q9NWF9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF216Q9NWF9 HNRNPA1P5-201ENST00000558213 966 ntBASIC21.22■□□□□ 0.99
RNF216Q9NWF9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms