Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBFOX1Q9NWB1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBFOX1Q9NWB1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
RBFOX1Q9NWB1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 C1QL1P1-201ENST00000568105 661 ntBASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 AC004264.1-201ENST00000608354 794 ntBASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.26■□□□□ 0.19
RBFOX1Q9NWB1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 ESRRAP1-201ENST00000400596 1257 ntBASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 AL023875.1-201ENST00000640777 796 ntBASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX1Q9NWB1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 AC138028.4-201ENST00000564984 1845 ntBASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 AC239809.2-201ENST00000415381 517 ntBASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RBFOX1Q9NWB1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms