Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 AC026471.5-201ENST00000615068 467 ntBASIC17.18■□□□□ 0.34
RLIMQ9NVW2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RLIMQ9NVW2 AC020916.1-201ENST00000587762 1774 ntBASIC17.17■□□□□ 0.34
RLIMQ9NVW2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 GPAT2P1-201ENST00000444924 1672 ntBASIC17.17■□□□□ 0.34
RLIMQ9NVW2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 AL109659.2-201ENST00000606809 1674 ntBASIC17.17■□□□□ 0.34
RLIMQ9NVW2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 CRYGFP-201ENST00000418459 633 ntBASIC17.17■□□□□ 0.34
RLIMQ9NVW2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 AC134043.2-201ENST00000624206 2238 ntBASIC17.17■□□□□ 0.34
RLIMQ9NVW2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RLIMQ9NVW2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 AC008550.1-201ENST00000511500 884 ntBASIC17.16■□□□□ 0.34
RLIMQ9NVW2 AP003071.4-201ENST00000562276 1284 ntBASIC17.16■□□□□ 0.34
RLIMQ9NVW2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 TMEM191A-211ENST00000637163 1067 ntBASIC17.16■□□□□ 0.34
RLIMQ9NVW2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 AC099343.3-201ENST00000605834 2503 ntBASIC17.16■□□□□ 0.34
RLIMQ9NVW2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RLIMQ9NVW2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 AL023284.2-201ENST00000405850 579 ntBASIC17.15■□□□□ 0.34
RLIMQ9NVW2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 TSPY7P-201ENST00000431358 1114 ntBASIC17.15■□□□□ 0.34
RLIMQ9NVW2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms