Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 NBPF21P-201ENST00000425093 1451 ntBASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC3Q9NUV7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 AC133041.1-202ENST00000642053 222 ntBASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SPTLC3Q9NUV7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 KRT8P41-201ENST00000533985 1514 ntBASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 AC008556.1-201ENST00000610908 2040 ntBASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC3Q9NUV7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPTLC3Q9NUV7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 PRKY-204ENST00000533551 1019 ntBASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 AL391005.1-201ENST00000623953 2435 ntBASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTLC3Q9NUV7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms