Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 LINC01126-201ENST00000623515 1646 ntBASIC21.71■■□□□ 1.07
RTN4Q9NQC3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 AC034268.1-201ENST00000441047 882 ntBASIC21.71■■□□□ 1.07
RTN4Q9NQC3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RTN4Q9NQC3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 PP12613-201ENST00000424958 2230 ntBASIC21.7■■□□□ 1.06
RTN4Q9NQC3 KRT18P11-201ENST00000435214 1283 ntBASIC21.7■■□□□ 1.06
RTN4Q9NQC3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 MFSD11-216ENST00000590393 1141 ntBASIC21.7■■□□□ 1.06
RTN4Q9NQC3 AC105020.6-201ENST00000621523 1217 ntBASIC21.7■■□□□ 1.06
RTN4Q9NQC3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.7■■□□□ 1.06
RTN4Q9NQC3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 AL512353.2-201ENST00000448759 1962 ntBASIC21.7■■□□□ 1.06
RTN4Q9NQC3 AC068338.2-201ENST00000563278 1430 ntBASIC21.7■■□□□ 1.06
RTN4Q9NQC3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTN4Q9NQC3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 PCDHB17P-201ENST00000539533 2393 ntBASIC21.69■■□□□ 1.06
RTN4Q9NQC3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 CNN2P6-201ENST00000439038 900 ntBASIC21.69■■□□□ 1.06
RTN4Q9NQC3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.69■■□□□ 1.06
RTN4Q9NQC3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms