Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTA1Q9NP79 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.57■□□□□ 0.88
VTA1Q9NP79 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 AC005332.7-201ENST00000614046 2005 ntBASIC20.56■□□□□ 0.88
VTA1Q9NP79 HLA-A-201ENST00000376802 1334 ntBASIC20.56■□□□□ 0.88
VTA1Q9NP79 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 AC079776.4-201ENST00000511039 504 ntBASIC20.56■□□□□ 0.88
VTA1Q9NP79 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTA1Q9NP79 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.56■□□□□ 0.88
VTA1Q9NP79 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VTA1Q9NP79 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
VTA1Q9NP79 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTA1Q9NP79 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTA1Q9NP79 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTA1Q9NP79 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VTA1Q9NP79 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
VTA1Q9NP79 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.55■□□□□ 0.88
VTA1Q9NP79 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VTA1Q9NP79 TP73-AS1-207ENST00000624167 988 ntBASIC20.55■□□□□ 0.88
VTA1Q9NP79 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTA1Q9NP79 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTA1Q9NP79 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTA1Q9NP79 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VTA1Q9NP79 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTA1Q9NP79 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.55■□□□□ 0.88
VTA1Q9NP79 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.55■□□□□ 0.88
VTA1Q9NP79 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTA1Q9NP79 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTA1Q9NP79 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTA1Q9NP79 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VTA1Q9NP79 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTA1Q9NP79 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VTA1Q9NP79 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 AC068472.1-201ENST00000474589 881 ntBASIC20.54■□□□□ 0.88
VTA1Q9NP79 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTA1Q9NP79 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 AC005336.2-201ENST00000593183 939 ntBASIC20.54■□□□□ 0.88
VTA1Q9NP79 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTA1Q9NP79 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTA1Q9NP79 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.54■□□□□ 0.88
VTA1Q9NP79 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VTA1Q9NP79 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.53■□□□□ 0.88
VTA1Q9NP79 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTA1Q9NP79 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTA1Q9NP79 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTA1Q9NP79 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTA1Q9NP79 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTA1Q9NP79 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.53■□□□□ 0.88
VTA1Q9NP79 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.53■□□□□ 0.88
VTA1Q9NP79 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTA1Q9NP79 AC009154.2-201ENST00000621177 724 ntBASIC20.53■□□□□ 0.88
VTA1Q9NP79 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTA1Q9NP79 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTA1Q9NP79 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTA1Q9NP79 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VTA1Q9NP79 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
VTA1Q9NP79 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.52■□□□□ 0.88
VTA1Q9NP79 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTA1Q9NP79 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VTA1Q9NP79 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTA1Q9NP79 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VTA1Q9NP79 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.52■□□□□ 0.88
VTA1Q9NP79 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTA1Q9NP79 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.52■□□□□ 0.88
VTA1Q9NP79 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms