Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.61■□□□□ 0.41
BRF2Q9HAW0 TSPY15P-201ENST00000457163 923 ntBASIC17.61■□□□□ 0.41
BRF2Q9HAW0 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.61■□□□□ 0.41
BRF2Q9HAW0 AC138028.4-201ENST00000564984 1845 ntBASIC17.61■□□□□ 0.41
BRF2Q9HAW0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 SLC25A6P5-201ENST00000435663 894 ntBASIC17.6■□□□□ 0.41
BRF2Q9HAW0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 KRT8P9-201ENST00000558927 1449 ntBASIC17.6■□□□□ 0.41
BRF2Q9HAW0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BRF2Q9HAW0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 INGX-201ENST00000359239 846 ntBASIC17.59■□□□□ 0.41
BRF2Q9HAW0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.59■□□□□ 0.41
BRF2Q9HAW0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 PHGDH-209ENST00000641074 1780 ntBASIC17.58■□□□□ 0.41
BRF2Q9HAW0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 FLJ13224-201ENST00000313737 1514 ntBASIC17.58■□□□□ 0.41
BRF2Q9HAW0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
BRF2Q9HAW0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms