Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLR1BQ9H9Y6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 AP000997.3-201ENST00000623333 2250 ntBASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 KRT8P11-201ENST00000409686 1436 ntBASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR1BQ9H9Y6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
POLR1BQ9H9Y6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.21■□□□□ 0.5
POLR1BQ9H9Y6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
POLR1BQ9H9Y6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 SPDYE15P-201ENST00000424157 909 ntBASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 AC135050.7-201ENST00000624508 2218 ntBASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR1BQ9H9Y6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLR1BQ9H9Y6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms