Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC104581.1-202ENST00000635932 2618 ntBASIC20.67■□□□□ 0.9
BCAS3Q9H6U6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCAS3Q9H6U6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCAS3Q9H6U6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCAS3Q9H6U6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCAS3Q9H6U6 ANO7L1-203ENST00000602586 1720 ntBASIC20.67■□□□□ 0.9
BCAS3Q9H6U6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BCAS3Q9H6U6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.67■□□□□ 0.9
BCAS3Q9H6U6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 SDHAP2-201ENST00000455183 2001 ntBASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 LINC00265-3P-201ENST00000447588 903 ntBASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 TOB2P1-201ENST00000469761 992 ntBASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 AP000867.3-201ENST00000524675 377 ntBASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 GPR32P1-201ENST00000601788 811 ntBASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
BCAS3Q9H6U6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BCAS3Q9H6U6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
BCAS3Q9H6U6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.64■□□□□ 0.9
BCAS3Q9H6U6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
BCAS3Q9H6U6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.64■□□□□ 0.9
BCAS3Q9H6U6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.64■□□□□ 0.9
BCAS3Q9H6U6 AC120498.9-201ENST00000339021 3867 ntBASIC20.64■□□□□ 0.9
BCAS3Q9H6U6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
BCAS3Q9H6U6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 RN7SL606P-201ENST00000472779 293 ntBASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 PRELID1P1-202ENST00000567272 903 ntBASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 AL732292.2-201ENST00000609649 430 ntBASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 IGHV3-41-201ENST00000613121 348 ntBASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BCAS3Q9H6U6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms