Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBB1Q9H4B7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBB1Q9H4B7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB1Q9H4B7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB1Q9H4B7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBB1Q9H4B7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 RPS2P55-201ENST00000397318 883 ntBASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 AC107956.1-201ENST00000494359 873 ntBASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 MIR3180-5-201ENST00000583743 153 ntBASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TUBB1Q9H4B7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 AL163051.1-201ENST00000569214 1512 ntBASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 ABHD17AP1-201ENST00000358206 933 ntBASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TUBB1Q9H4B7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 FZD10-202ENST00000539839 3282 ntBASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 CRYGFP-201ENST00000418459 633 ntBASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 AC142381.4-202ENST00000563973 229 ntBASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.73■□□□□ 0.43
TUBB1Q9H4B7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms