Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
HIPK3Q9H422 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HIPK3Q9H422 AC141586.3-201ENST00000562166 1838 ntBASIC20.07■□□□□ 0.8
HIPK3Q9H422 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.07■□□□□ 0.8
HIPK3Q9H422 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.07■□□□□ 0.8
HIPK3Q9H422 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.07■□□□□ 0.8
HIPK3Q9H422 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.07■□□□□ 0.8
HIPK3Q9H422 AP001269.4-201ENST00000609611 512 ntBASIC20.07■□□□□ 0.8
HIPK3Q9H422 AC112777.1-201ENST00000540175 1423 ntBASIC20.07■□□□□ 0.8
HIPK3Q9H422 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HIPK3Q9H422 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HIPK3Q9H422 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.07■□□□□ 0.8
HIPK3Q9H422 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.06■□□□□ 0.8
HIPK3Q9H422 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.06■□□□□ 0.8
HIPK3Q9H422 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.06■□□□□ 0.8
HIPK3Q9H422 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.06■□□□□ 0.8
HIPK3Q9H422 AC113404.2-201ENST00000507884 177 ntBASIC20.06■□□□□ 0.8
HIPK3Q9H422 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.06■□□□□ 0.8
HIPK3Q9H422 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.06■□□□□ 0.8
HIPK3Q9H422 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.06■□□□□ 0.8
HIPK3Q9H422 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 AC008687.5-201ENST00000593746 558 ntBASIC20.06■□□□□ 0.8
HIPK3Q9H422 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.06■□□□□ 0.8
HIPK3Q9H422 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HIPK3Q9H422 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIPK3Q9H422 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIPK3Q9H422 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIPK3Q9H422 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 AL691403.2-201ENST00000618460 490 ntBASIC20.05■□□□□ 0.8
HIPK3Q9H422 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIPK3Q9H422 HEIH-201ENST00000623091 1652 ntBASIC20.05■□□□□ 0.8
HIPK3Q9H422 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.05■□□□□ 0.8
HIPK3Q9H422 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HIPK3Q9H422 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIPK3Q9H422 AC104109.2-201ENST00000602919 1418 ntBASIC20.04■□□□□ 0.8
HIPK3Q9H422 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIPK3Q9H422 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIPK3Q9H422 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIPK3Q9H422 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIPK3Q9H422 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 PGAM5P1-201ENST00000518923 814 ntBASIC20.04■□□□□ 0.8
HIPK3Q9H422 KRT18P41-201ENST00000518924 1277 ntBASIC20.04■□□□□ 0.8
HIPK3Q9H422 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 AC145285.3-201ENST00000564603 959 ntBASIC20.04■□□□□ 0.8
HIPK3Q9H422 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HIPK3Q9H422 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.04■□□□□ 0.8
HIPK3Q9H422 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIPK3Q9H422 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIPK3Q9H422 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HIPK3Q9H422 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIPK3Q9H422 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIPK3Q9H422 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIPK3Q9H422 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HIPK3Q9H422 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HIPK3Q9H422 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HIPK3Q9H422 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms