Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX5Q9H2C1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX5Q9H2C1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX5Q9H2C1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.42■□□□□ 0.7
LHX5Q9H2C1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX5Q9H2C1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX5Q9H2C1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX5Q9H2C1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX5Q9H2C1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX5Q9H2C1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 AK4P3-201ENST00000418260 669 ntBASIC19.41■□□□□ 0.7
LHX5Q9H2C1 YBX1P2-201ENST00000489612 999 ntBASIC19.41■□□□□ 0.7
LHX5Q9H2C1 AC034232.1-201ENST00000506026 1064 ntBASIC19.41■□□□□ 0.7
LHX5Q9H2C1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 AC139887.4-201ENST00000607877 719 ntBASIC19.41■□□□□ 0.7
LHX5Q9H2C1 AL157888.1-201ENST00000631930 593 ntBASIC19.41■□□□□ 0.7
LHX5Q9H2C1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 AL390961.4-201ENST00000623958 2535 ntBASIC19.41■□□□□ 0.7
LHX5Q9H2C1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LHX5Q9H2C1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 AC099343.3-201ENST00000605834 2503 ntBASIC19.4■□□□□ 0.7
LHX5Q9H2C1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 AC117947.1-201ENST00000427448 529 ntBASIC19.4■□□□□ 0.7
LHX5Q9H2C1 PVRIG2P-201ENST00000435460 978 ntBASIC19.4■□□□□ 0.7
LHX5Q9H2C1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 AC087388.1-201ENST00000571370 1112 ntBASIC19.4■□□□□ 0.7
LHX5Q9H2C1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LHX5Q9H2C1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LHX5Q9H2C1 AL024508.2-201ENST00000607749 1894 ntBASIC19.39■□□□□ 0.7
LHX5Q9H2C1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.39■□□□□ 0.7
LHX5Q9H2C1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LHX5Q9H2C1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 RNF165-205ENST00000588679 2904 ntBASIC19.39■□□□□ 0.69
LHX5Q9H2C1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 LINC01126-201ENST00000623515 1646 ntBASIC19.39■□□□□ 0.69
LHX5Q9H2C1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LHX5Q9H2C1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX5Q9H2C1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX5Q9H2C1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX5Q9H2C1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX5Q9H2C1 STARP1-201ENST00000397973 869 ntBASIC19.38■□□□□ 0.69
LHX5Q9H2C1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms