Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.2■□□□□ 0.66
DDX47Q9H0S4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DDX47Q9H0S4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 AC004951.3-201ENST00000418645 1148 ntBASIC19.19■□□□□ 0.66
DDX47Q9H0S4 RPS2P4-201ENST00000476944 856 ntBASIC19.19■□□□□ 0.66
DDX47Q9H0S4 AC026366.1-201ENST00000488803 879 ntBASIC19.19■□□□□ 0.66
DDX47Q9H0S4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 AL645608.8-201ENST00000606034 2086 ntBASIC19.19■□□□□ 0.66
DDX47Q9H0S4 AC012317.2-201ENST00000623305 2251 ntBASIC19.19■□□□□ 0.66
DDX47Q9H0S4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DDX47Q9H0S4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 AL109659.2-201ENST00000606809 1674 ntBASIC19.18■□□□□ 0.66
DDX47Q9H0S4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.18■□□□□ 0.66
DDX47Q9H0S4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 AC008040.2-201ENST00000461049 708 ntBASIC19.18■□□□□ 0.66
DDX47Q9H0S4 RNA5SP413-201ENST00000516373 109 ntBASIC19.18■□□□□ 0.66
DDX47Q9H0S4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 CKBP1-201ENST00000565489 1086 ntBASIC19.18■□□□□ 0.66
DDX47Q9H0S4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 AC124016.1-201ENST00000609552 612 ntBASIC19.18■□□□□ 0.66
DDX47Q9H0S4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.18■□□□□ 0.66
DDX47Q9H0S4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
DDX47Q9H0S4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms