Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 AC112907.3-201ENST00000577781 2400 ntBASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 KRT18P28-201ENST00000453838 1332 ntBASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE2OQ9C0C9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 FGFR3P6-201ENST00000457012 610 ntBASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 SART3-203ENST00000546611 1184 ntBASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 AC024563.2-201ENST00000603282 481 ntBASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.25■□□□□ 0.83
UBE2OQ9C0C9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 AIRN-201ENST00000601203 4374 ntBASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 AL353692.3-201ENST00000407031 1396 ntBASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 AC104417.2-201ENST00000562989 1793 ntBASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 AC034105.1-201ENST00000563488 319 ntBASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 MTDHP3-201ENST00000594186 672 ntBASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2OQ9C0C9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 AC092364.2-202ENST00000597012 1073 ntBASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2OQ9C0C9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 KRT8P3-201ENST00000519669 1449 ntBASIC20.22■□□□□ 0.83
UBE2OQ9C0C9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms