Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDH11YQ9BZA8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PCDH11YQ9BZA8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDH11YQ9BZA8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.84■■□□□ 1.41
PCDH11YQ9BZA8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.84■■□□□ 1.41
PCDH11YQ9BZA8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.84■■□□□ 1.41
PCDH11YQ9BZA8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.84■■□□□ 1.41
PCDH11YQ9BZA8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDH11YQ9BZA8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDH11YQ9BZA8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDH11YQ9BZA8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDH11YQ9BZA8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.83■■□□□ 1.4
PCDH11YQ9BZA8 RPL13AP23-201ENST00000480739 586 ntBASIC23.83■■□□□ 1.4
PCDH11YQ9BZA8 AC011467.2-201ENST00000598425 242 ntBASIC23.83■■□□□ 1.4
PCDH11YQ9BZA8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 MYLKP1-201ENST00000509077 1580 ntBASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 MTCL1P1-201ENST00000446207 792 ntBASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 AC092865.5-201ENST00000545435 363 ntBASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDH11YQ9BZA8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 AC099343.3-201ENST00000605834 2503 ntBASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 PMS2P7-201ENST00000506558 1336 ntBASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PCDH11YQ9BZA8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 AC007952.6-201ENST00000573168 2673 ntBASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 AC003957.1-201ENST00000625108 2673 ntBASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 AC125634.1-201ENST00000438758 1403 ntBASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 MIR1233-2-201ENST00000408138 82 ntBASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 MIR1233-1-201ENST00000408722 82 ntBASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDH11YQ9BZA8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH11YQ9BZA8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDH11YQ9BZA8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
PCDH11YQ9BZA8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDH11YQ9BZA8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDH11YQ9BZA8 ZNF259P1-201ENST00000407656 1365 ntBASIC23.79■■□□□ 1.4
PCDH11YQ9BZA8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PCDH11YQ9BZA8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms