Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RN7SL510P-201ENST00000581311 263 ntBASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AC138894.3-201ENST00000603787 634 ntBASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AL390719.2-201ENST00000606993 987 ntBASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AL121672.3-201ENST00000608644 468 ntBASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AC004263.2-201ENST00000617183 678 ntBASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AL691432.3-201ENST00000621860 400 ntBASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AC093525.10-201ENST00000625130 1569 ntBASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 LINC01126-201ENST00000623515 1646 ntBASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC6.25□□□□□ -1.41
KRTAP4-3Q9BYR4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 CHCHD2P8-201ENST00000429873 447 ntBASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 AC079781.3-201ENST00000449110 356 ntBASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 AC009078.2-202ENST00000463353 338 ntBASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 KRT8P26-201ENST00000534154 1276 ntBASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
KRTAP4-3Q9BYR4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms