Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 TERC-201ENST00000602385 541 ntBASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RTFDC1Q9BY42 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 ZNF259P1-201ENST00000407656 1365 ntBASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 AL138831.2-201ENST00000606564 490 ntBASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RTFDC1Q9BY42 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 BX842568.4-201ENST00000421222 227 ntBASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 PGAM5P1-201ENST00000518923 814 ntBASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 AC145285.3-201ENST00000564603 959 ntBASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RTFDC1Q9BY42 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 IGHV3-22-201ENST00000520721 359 ntBASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 AC011467.2-201ENST00000598425 242 ntBASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RTFDC1Q9BY42 AC009102.3-201ENST00000623118 1491 ntBASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms