Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 SLC25A1P2-201ENST00000430693 912 ntBASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 PP12613-201ENST00000424958 2230 ntBASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RSPO3Q9BXY4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 AL024508.2-201ENST00000607749 1894 ntBASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 SNORA78-201ENST00000459373 127 ntBASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 AC009102.3-201ENST00000623118 1491 ntBASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.91■□□□□ 0.3
RSPO3Q9BXY4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 MIR149-201ENST00000384879 89 ntBASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 MIR1238-201ENST00000408483 83 ntBASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 KRT18P23-201ENST00000435622 1283 ntBASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 TSPY17P-201ENST00000450329 467 ntBASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.9■□□□□ 0.3
RSPO3Q9BXY4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RSPO3Q9BXY4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.89■□□□□ 0.3
RSPO3Q9BXY4 AC006116.8-202ENST00000587620 1550 ntBASIC16.89■□□□□ 0.3
RSPO3Q9BXY4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms