Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TMEM261P1-201ENST00000604899 340 ntBASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 REXO1L3P-201ENST00000622202 1288 ntBASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 AC010507.1-201ENST00000633895 436 ntBASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 AL049796.1-201ENST00000565336 1766 ntBASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 FO538757.1-201ENST00000623083 1397 ntBASIC18.54■□□□□ 0.56
COL25A1Q9BXS0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 AC079776.2-201ENST00000641154 1609 ntBASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 ELK2AP-201ENST00000392510 1007 ntBASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 AC092506.1-202ENST00000401022 528 ntBASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 AL627223.1-201ENST00000416693 442 ntBASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 AL512638.1-201ENST00000457493 794 ntBASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 SERBP1P5-201ENST00000510079 1181 ntBASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 AC004790.2-201ENST00000623588 572 ntBASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 AC006333.2-201ENST00000607957 2099 ntBASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL25A1Q9BXS0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL25A1Q9BXS0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.52■□□□□ 0.55
COL25A1Q9BXS0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.52■□□□□ 0.55
COL25A1Q9BXS0 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.52■□□□□ 0.55
COL25A1Q9BXS0 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.52■□□□□ 0.55
COL25A1Q9BXS0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL25A1Q9BXS0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL25A1Q9BXS0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 AC092720.2-201ENST00000602388 1665 ntBASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 AC025580.3-201ENST00000617932 1424 ntBASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 AC107890.1-201ENST00000422478 521 ntBASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 AC096734.2-201ENST00000562054 433 ntBASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 SPTSSB-204ENST00000617024 1292 ntBASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 AC034236.2-201ENST00000606662 1610 ntBASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.51■□□□□ 0.55
COL25A1Q9BXS0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
COL25A1Q9BXS0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL25A1Q9BXS0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms