Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.93■□□□□ 0.46
PKP4Q99569 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.93■□□□□ 0.46
PKP4Q99569 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PKP4Q99569 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PKP4Q99569 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PKP4Q99569 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PKP4Q99569 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PKP4Q99569 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.93■□□□□ 0.46
PKP4Q99569 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.93■□□□□ 0.46
PKP4Q99569 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PKP4Q99569 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
PKP4Q99569 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.93■□□□□ 0.46
PKP4Q99569 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PKP4Q99569 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PKP4Q99569 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PKP4Q99569 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PKP4Q99569 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.92■□□□□ 0.46
PKP4Q99569 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PKP4Q99569 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.92■□□□□ 0.46
PKP4Q99569 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 MIR149-201ENST00000384879 89 ntBASIC17.92■□□□□ 0.46
PKP4Q99569 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.92■□□□□ 0.46
PKP4Q99569 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.92■□□□□ 0.46
PKP4Q99569 AL441883.1-201ENST00000566170 1045 ntBASIC17.92■□□□□ 0.46
PKP4Q99569 MIR3180-4-201ENST00000582223 153 ntBASIC17.92■□□□□ 0.46
PKP4Q99569 AC011558.1-201ENST00000623459 338 ntBASIC17.92■□□□□ 0.46
PKP4Q99569 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PKP4Q99569 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.92■□□□□ 0.46
PKP4Q99569 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PKP4Q99569 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.92■□□□□ 0.46
PKP4Q99569 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
PKP4Q99569 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.92■□□□□ 0.46
PKP4Q99569 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PKP4Q99569 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 SDHAP2-201ENST00000455183 2001 ntBASIC17.91■□□□□ 0.46
PKP4Q99569 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.91■□□□□ 0.46
PKP4Q99569 AC009102.3-201ENST00000623118 1491 ntBASIC17.91■□□□□ 0.46
PKP4Q99569 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 RCN1P1-201ENST00000400413 996 ntBASIC17.91■□□□□ 0.46
PKP4Q99569 AC117947.1-201ENST00000427448 529 ntBASIC17.91■□□□□ 0.46
PKP4Q99569 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.91■□□□□ 0.46
PKP4Q99569 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.91■□□□□ 0.46
PKP4Q99569 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.91■□□□□ 0.46
PKP4Q99569 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.91■□□□□ 0.46
PKP4Q99569 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PKP4Q99569 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PKP4Q99569 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.91■□□□□ 0.46
PKP4Q99569 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.91■□□□□ 0.46
PKP4Q99569 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.91■□□□□ 0.46
PKP4Q99569 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PKP4Q99569 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PKP4Q99569 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PKP4Q99569 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.9■□□□□ 0.46
PKP4Q99569 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
PKP4Q99569 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms