Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC091390.4-202ENST00000476426 537 ntBASIC16.79■□□□□ 0.28
SNX18Q96RF0 AC107956.1-201ENST00000494359 873 ntBASIC16.79■□□□□ 0.28
SNX18Q96RF0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 MYC-208ENST00000641036 567 ntBASIC16.79■□□□□ 0.28
SNX18Q96RF0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SNX18Q96RF0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNX18Q96RF0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 AL031985.4-201ENST00000642138 673 ntBASIC16.78■□□□□ 0.28
SNX18Q96RF0 MTMR9LP-203ENST00000426597 1545 ntBASIC16.78■□□□□ 0.28
SNX18Q96RF0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.78■□□□□ 0.28
SNX18Q96RF0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.78■□□□□ 0.28
SNX18Q96RF0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNX18Q96RF0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX18Q96RF0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX18Q96RF0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX18Q96RF0 TSPY7P-201ENST00000431358 1114 ntBASIC16.77■□□□□ 0.28
SNX18Q96RF0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX18Q96RF0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 AC233702.5-201ENST00000584107 538 ntBASIC16.77■□□□□ 0.28
SNX18Q96RF0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNX18Q96RF0 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.77■□□□□ 0.28
SNX18Q96RF0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX18Q96RF0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.77■□□□□ 0.27
SNX18Q96RF0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.77■□□□□ 0.27
SNX18Q96RF0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SNX18Q96RF0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.77■□□□□ 0.27
SNX18Q96RF0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX18Q96RF0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
SNX18Q96RF0 AL162741.1-201ENST00000565563 1558 ntBASIC16.77■□□□□ 0.27
SNX18Q96RF0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SNX18Q96RF0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SNX18Q96RF0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.76■□□□□ 0.27
SNX18Q96RF0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX18Q96RF0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX18Q96RF0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SNX18Q96RF0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX18Q96RF0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms